Weninger W
Computergestützte dreidimensionale Rekonstruktion histologischer Schnittserien (1995).
Thesis; Department of Anatomy; Adviser: Univ. Prof. DDr. G.B. Müller

Weninger WJ, Streicher J, Müller GB
Dreidimensionale Rekonstruktion histologischer Schnittserien am Computer
Wien Klin Wochenschr (1996) 108: 515-520

Streicher J Weninger WJ, Müller GB
External Marker Based Automatic Congruencing: A New Method of 3D-Reconstruction from serial sections
Anat Rec (1997) 248: 583-602

Weninger WJ, Streicher J, Müller GB
Anatomical Compartments of the parasellar region: Adipose tissue bodies represent intracranial continuations of extracranial spaces
J Anat (1997) 191: 269-275

Weninger WJ & Müller GB
The sympathetic nerves of the parasellar region: Pathways to the orbit and the brain
Acta Anat (1997) 160: 254-260

Weninger WJ, Meng S, Streicher J, Müller GB
A rapid method of 3D-reconstruction from serial sections: applications in anatomy and embryology
Anat Embryol (1998) 197: 341-348

Weninger WJ & Müller GB
The parasellar region of human infants: cavernous sinus topography and surgical approaches
J Neurosurg (1999) 90: 484-490

Weninger WJ, Müller GB, Reiter C, Meng S, Rabl SU
Intimal hyperplasia of the infant parasellar carotid artery: a potential developmental factor in atherosclerosis and SIDS
Circ Res (1999) 85: 970-975

Mohun TJ, Leong LM, Weninger WJ, Sparrow, DB
The morphology of heart development in Xenopus laevis
Dev Biol (2000) 218: 74-88

Weninger WJ & Pramhas D
Compartments of the adult parasellar region
J Anat (2000) 197: 681-686

Weninger WJ & Mohun T                               
Episcopic Fluorescence Image Capturing
in “Gene Expression Monitoring and 3D Visualization”, edited by J Streicher, Springer NYC

Weninger WJ & Mohun TJ
Phenotyping transgenic embryos: A rapid 3D-screening method based on Episcopic Flourescence Imaging Capturing (EFIC)
Nature Genet (2002) 30: 59-65

Martinez Barbera JB, Rodriguez TA, Greene NDE, Weninger WJ, Simeone A, Copp AJ, Beddington RSP, Dunwoodie S
Folic acid prevents exencephaly in Cited2 deficient mice
Hum-Mol-Genet (2002) 11: 283-293

Weninger WJ, Meng S, Geyer SH, Weninger SUG
Morphology and functional anatomy of the growing thorax
Radiologe (2003) 43: 1036-1044                                          (Invited)

Weninger WJ & Prokop M
In vivo 3D analysis of the adipose tissue in the orbital apex and the compartments of the parasellar  region
Clinc Anat (2004) 17: 112-117

Weninger WJ, Tassy O, Darras S, Geyer SH, Thieffry D
From experimental imaging techniques to virtual Embryology
Hist Phil Life Sci (2004) 26: 355-375                                     (Invited)

Weninger WJ, Lopes Floro K, Bennett MB, Withington SL, Preis JI, Martinez Barbera JP, Mohun TJ, Dunwoodie S
Cited2 is required both for heart morphogenesis and establishment of the left-right axis in mouse development
Development (2005) 132: 1337-1348

Weninger WJ, Geyer SH, Mohun TJ, Rasskin-Gutman D, Matsui T, Ribeiro I, daFCosta L, Izpisúa-Belmonte JC, Müller GB
High-resolution episcopic microscopy: a rapid technique for high detailed 3D analysis of gene activity in the context of tissue architecture and morphology
Anat Embryol (2006) 211: 213-221
http://www.meduniwien.ac.at/3D-Rekonstr/HREM/

Pieles G, Geyer HS, Szumska D, Schneider J, Neubauer S, Clarke K, Dorfmeister K, Franklyn A, Brown SD, Battacharya S, Weninger WJ
µMRI-HREM pipeline for high-throughput, high resolution phenotyping of murine embryos
J Anat (2007) 211: 132-137

Weninger WJ & Mohun TJ
Three dimensional analysis of molecular signals with episcopic imaging techniques
Methods Mol Biol (2007) 411:35-46.


Geyer SH, Maurer B & Weninger WJ
3D visualisation of embryo anatomy
in Research Advances in Anatomy (ed Mohan RM), GRN (2008) pp 1-17

Meng S, Costa LdaF, Geyer SH, Viana MP, Reiter C, Müller GB, Weninger WJ
Three-dimensional description and mathematical characterization of the parasellar internal carotid artery in human infants.
J Anat (2008) 212: 636-44.

Meng S, Geyer SH, Costa LD, Viana MP, Weninger WJ
Objective characterization of the course of the parasellar internal carotid artery using mathematical tools
Surg Radiol Anat (2008) 30: 519-526.

Weninger WJ & Geyer SH
Episcopic 3D imaging methods: tools for researching gene function
Curr Genomics (2008) 9: 282-289.

Weninger WJ & Geyer SH
Three-dimensional (3D) visualisation of the cardiovascular system of mouse embryos and fetuses
The Open Cardiovascular Imaging Journal (2009) 1: 1-12.

Lee SE, Wi JS, Min Yl, Jung C, Ahn KY, Bae CS, Kim BY, Park SS, Oh CS, Weninger WJ, Nam KI
Distribution and three-dimensional appearance of the interstitial cells of Cajal in the rat stomach and duodenum
Microsc Res Tech (2009), 72: 951-956.

Weninger WJ, Maurer B, Zendron, Dorfmeister K, Geyer SH
Measurements of the diameters of the great arteries and the smilunar valves of chick and mouse embryos
J Microsc (2009) 234: 173-190.

Geyer SH, Mohun TJ, Weninger WJ
Visualizing vertebrate embryos with episcopic 3D imaging techniques
TSW Development & Embryology (2009) 9: 1423-1437.

Mohun TJ, Weninger WJ, Bhattacharya S
Imaging cardiac developmental malformations in the mouse embryo
Heart Development and Regeneration (ed Rosenthal N & Harvey RP), Elsevier (2010) pp 779-791

Mohun TJ & Weninger WJ
Episcopic 3D imaging of embryos
Imaging In Developmental Biology: A Laboratory Manual (ed Wong R and Sharpe J) Cold Spring Harbor Laboratory Press (2010)

Mohun TJ, Weninger WJ
Imaging heart development using high-resolution episcopic microscopy
Curr Opin Genet Dev (2011) 21: 573-578

Kee HJ, Kim J-R, Joung J, Choe N, Lee SE, Eom GH, Kim JC, Geyer SH, Jijiwa M, Kato T, Kawai K, Weninger WJ, Seo SB, Nam K-I, Neong MH, Takahashi M, Kook H.
Ret finger protein inhibits muscle differentiation by modulating serum response factor and enhancer of polycomb1
Cell Death and Differentiation (2012), 19: 121-131; Epub 2011 Jun. 3

Geyer SH, Maurer B, Pötz L, Singh J, Weninger WJ
HREM-data based measurements of the arteries of mouse embryos: evaluation of significance and reproducibility under routine conditions
Cells Tissues Organs (2012), 195: 524-534

Geyer SH, Weninger WJ
Some mice feature 5th pharyngeal arch arteries and double lumen aortic arch malformations
Cells Tissues Organs (2012), 196: 90-98

Mohun TJ, Weninger WJ
Episcioic three-dimensional imaging of embryos
Cold Spring Harb Protoc (2012) 641-646

Mohun TJ, Weninger WJ
Embedding embryos for Episcopic Fluorescence Image Capturing (EFIC)
Cold Spring Harb Protoc (2012) 675-677

Mohun TJ, Weninger WJ
Embedding Embryos for High-Resolution Episcopic Microscopy (HREM)
Cold Spring Harb Protoc (2012) 678-680

Mohun TJ, Weninger WJ
Generation of volume data by episcopic three-dimensional imaging of embryos
Cold Spring Harb Protc (2012) 681-682

Nöhammer M, Geyer SH, Weninger WJ
Flesh and Blood
Cell, CellPictureShow-Skin at http://www.cell.com/cell_picture_show-skin

Geyer S.H., Maurer B, Dirnbacher K., Weninger W.J.
Dimensions of the great intrathoracic arteries of early mouse fetuses of the C57BL/6 strain
The Open Anatomy Journal (2012) 4: 1-6

Geyer S.H., Mohun T.J., Kamolz L.P., Weninger W.J.
High resolution episcopic microscopy - current applications
Current Biotechnology (2012) 1: 281-286

Weninger WJ, Geyer SH
Models in researching cardiovascular morphogenesis
Birth Defects Res C Embryo Today (2012) 96:163-175

Weninger WJ, Geyer SH
Episcopic 3D Imaging Methods: Tools for Researching Gene Function. in "Changing Views On Living Organisms" (ed. Neri C), pp. 169-188. Bentham Sciences (2013)

Weninger WJ, Kamolz LP, Geyer SH
3D visualisation of skin replacement material in "Dermal Replacements in Gerneral, Burn, Plastic Surgery" (ed. Kamolz L and Lumenta D), Springer-Verlag (2013)

Maurer B, Geyer SH, Weninger WJ
A chick embryo with a yet unclassified type of cephalothoracopagus malformation and a hypothesis for explaining its genesis
Anat Histol Embryol (2013) 42:191-200

Geyer SH, Weninger WJ
Metric characterization of the aortic arch of early mouse fetuses and of a fetus featuring a double lumen aortic arch malformation
Ann Anat (2013) 195:175-182

Moghaddam AS, Kamolz LP, Weninger W, Parvizi D, Wiedner M, Lumenta DB
The use of Kerationocytes: Things we should keep in mind!
Eur Surg (2013), 45:154-160

Mohun T, Adms DJ, Baldock R, Bhattacharya S, Copp AJ, Hemberger M, Houart C, Hurles ME, Robertson E, Smith JC, Weaver T, Weninger W
Deciphering the mechanisms of developmental disorders (DMDD): a new programme for phenotyping embryonic lethal mice.
Dis Model Mech (2013) 6:562-566

Norris FC, Wong MD, Greene ND, Scambler PJ, Weaver T, Weninger WJ, Mohun TJ, Henkelman RM, Lythoge MF
A coming of age: advanced imaging technologies for characterising the developing mouse
Trends Genet (2013) 29:700-711

Geyer SH, Nöhammer MM, Tinhofer IE, Weninger WJ
The dermal arteries of the human thumb pad
J Anat (2013) 223:603-609

Liu M, Maurer B, Hermann B, Zabihian B, Sandrian MG, Unterhuber A, Baumann B, Zhang EZ, Beard PC, Weninger WJ, Drexler W
Dual modality optical coherence an whole-body photoacoustic tomography imaging of chick embryos in multiple developmental stages
Biomedical Optics Express (2014) 5:3150-3159

Meng S, Tinhofer I, Weninger WJ, Grisold W
Anatomical and ultrasound correlation of the superficial branch of the radial nerve
Muscle Nerve (2014), 50: 939-942

Weninger WJ, Geyer SH, Mohun TJ
High-resolution episcopic microscopy - HREM
Imaging and Microscopy (2014) 16 (4): 22-24

Geyer SH, Nöhammer MM, Mathä M, Reissig L, Tinhofer IE, Weninger WJ
High-resolution episcopic microscopy (HREM) - a tool for visualising skin biopsies
Microscopy and Microanalysis (2014) 20: 1356-1367

Wiedner M, Tinhofer IE, Kamolz LP, Moghaddam A, Justich I, Liegl-Atzwanger B, Bubalo V, Weninger WJ, Lumenta DB
Simultanous dermal matrix and autologous split-thickness skin graft transplantation in a porcine wound model: a three-dimensional histological analysis of revascularisation
Wound Repair and Regeneration (2014) 22: 749-754

Weninger WJ, Geyer SH, Martineau A, Galli A, Adams DJ, Wilson R, Mohun TJ
Phenotyping structural abnormalities in mouse embryos using high-resolution episcopic microcscopy
Disease Models & Mechanisms (2014) 7: 1143-1152

Bruneel B, Mathä M, Paesen R, Ameloot M, Weninger WJ, Huysseune A
Imaging the zebrafish dentation: From traditional approaches to emerging technologies
Zebrafish (2015), 12: 1-10

Jenner F, van Osch GJ, Weninger W, Geyer S, Stout T, van Weeren R, Brama P
The embryogenesis of the equine femorotibial joint: the equine interzone
Equine Vet J (2015), 47: 620-622

Meng S, Tinhofer, Weninger WJ, Grisold W
Ultrasound and anatomical correlation of the radial nerve at FROHSE'S arcade
Muscle Nerve (2015), 51: 853-858 

Geyer SH, Tinhofer IE, Lumenta DB, Kamolz LP, Ludwik B, Finnerty CC, Herndon DN, Weninger WJ
High-resolution episcopic microscopy (HREM): a useful technique for research in wound care
Ann Anat (2015) 197: 3-10

Meng S, Tinhofer I, Grisold W, Weninger WJ
Ultrasound-guided perineural injection at Guyon's Tunnel: An anatomic feasibility study
Ultrasound Med Biol (2015), 
41: 2119-21124

Meng S, Reissig L, Beikircher R, Tzou CJ, Grisold W, Weninger WJ
Longitudinal gliding of the median nerve in the carpal tunnel: ultrasound cadaveric evaluation of conventional and novel concepts of nerve mobilization
Arch Phys med Rehabil (2015), 96: 2207-2213

Wilson R, McGuire C, Mohun T, Adams D, Maldock R, Bhattacharya S, Collins J, Fineberg E, Firminger L, Galli A, Geyer S, Grifiths M, Hassan A, Hemberger M, Huart C, Melvin D, Prin F, Ramirez-Solis R, Reissig L, Robertson E, Rose J, Schneider J, Smith J, Szumska D, Tudor C, Vernet A, Weninger W, White J
Deciphering the mechanisms of developmental disorders: phenotype analysis of embryos from mutant mouse lines
Nucleic Acids Res (2016), 44(D1): D855-861

Wong R, Geyer S, Weninger W, Guimberteau JC, Wong J
The dynamic anatomy and patterning of skin
Exp Dermatol (2016), 25: 92-98

Meng S, Reissig LF, Tzou C-HJ, Meng K, Grisold W, Weninger W
Ultrasound of the hypoglossal nerve in the neck: visualization and initial clinical experience with patients
AJNR (2016), 37: 354-359

Rodriguez-Lorenzo A, Jensson D, Weninger WJ, Schmid M., Meng S, Tzou CJ
Platysma motor nerve transfer for restoring margnial mandibular nerve function
Plast Reconstr Surg Glob Open (2016), 4: e1164

Dickinson ME, Flenniken AM, Ji X, Teboul L, Wong MD, White JK, Meehan TF, Weninger WJ, Westerberg H, Adissu H, Baker CN, Bower L, Brown JM, Caddle LB, Chiani F, Clary D, Cleak J, Daly MJ, Denegre JM, Doe B, Dolan ME, Edie SM, Fuchs H, Gailus-Durner V, Galli A, Gambadoro A, Gallegos J, Guo S, Horner NR, Hsu CW, Johnson SJ, Kalaga S, Keith LC, Lanoue L, Lawson TN, Lek M, Mark M, Marschall S, Mason J, McElwee ML, Newbigging S, Nutter LM, Peterson KA, Ramirez-Solis R, Rowland DJ, Ryder E, Samocha KE, Seavitt JR, Selloum M, Szoke-Kovacs Z, Tamura M, Trainor AG, Tudose I, Wakana S, Warren J, Wendling O, West DB, Wong L, Yoshiki A; International Mouse Phenotyping Consortium; Jackson Laboratory; Infrastructure Nationale PHENOMIN, Institut Clinique de la Souris (ICS); Charles River Laboratories; MRC Harwell; Toronto Centre for Phenogenomics; Wellcome Trust Sanger Institute; RIKEN BioResource Center, MacArthur DG, Tocchini-Valentini GP, Gao X, Flicek P, Bradley A, Skarnes WC, Justice MJ, Parkinson HE, Moore M, Wells S, Braun RE, Svenson KL, de Angelis MH, Herault Y, Mohun T, Mallon AM, Henkelman RM, Brown SD, Adams DJ, Lloyd KC, McKerlie C, Beaudet AL, Bućan M, Murray SA.
High throughput discovery of novel developmental phenotypes
Nature (2016), 537(7621): 508-514

Placheta E, Tinhofer I, Schmid M, Reissig LF, Pona I, Weninger W, Rath T, Chuang DC, Tzou CJ
The spinal accessory nerve for functional muscle innervation in facial reanimation surgery: an anatomical and histomorphometric study
Ann Plast Surg (2016), 77: 640-644

Wilson E, Geyer SH, Reissig L, Rose J, Szumska D, Hardman E, Prin F, McGuire C, Ramirez-Solis R, White J, Galli A, Tudor C, Tuck E, Mazzeao C, Smith JC, Robertson E, Adams DJ, Mohun T, Weninger WJ
Highly variable penetrance of abnormal phenotypes in embryonic lethal knockout mice
Wellcome Open Res. (2016), 1: 1

Tzou CJ, Meng S, Tinhofer I, Reissig L, Pichler U, Steinbacher J, Pona I, Roka-Palkovits J, Rath T, Weninger WJ, Cheng MH
Surgical anatomy of the vascularized submental lymph node flap: Anatomical study of correlation of submental artery perforators and quantity of submental lymph node.
J Surg Oncol (2017), 115: 54-59

Hamscha UM, Tinhofer I, Heber S, Grisold W, Weninger WJ, Meng S
A reliable technique for US-guided perineural injection in ulnar neuropathy at the ellbow
Muscle Nerve (2017), 56:237-241

Tinhofer IE, Tzou CJ, Duscher D, Pollhammer MS, Weninger WJ, Huemer GM, Schmidt M.
Vascular territories of the medial upper arm - an anatomic study of the vascular basis for individual flap design.
Microscurgery (2017), 37: 618-623

Steinbacher J, Tinhofer IE, Meng S, Reissig LF, Placheta E, Roka-Palkovits J, Rath T, Cheng MH, Weninger WJ, Tzou CJ
The surgical anatomy of teh supraclavicular lymph node flap: A basis for the free vascularized lymph node transfer
J Surg Oncol (2017), 115: 60-62 


Geyer SH, Reissig L, Rose J, Wilson R, Prin F, Szumska D, Ramirez-Solis R, Tudor C, White J, Mohun TJ, Weninger WJ
A staging system for correct phenotype interpretation of mouse embryos harvested on embryonic day 14 (E14.5)
J Anat (2017), 230: 710-719

Geyer SH, Maurer-Gesek B, Reissig L, Weninger WJ
High-Resolution Episcopic Microscopy (HREM) - simple and robust protocols for processing and visualising organic materials
J Vis Exp [2017(125)]

Tinhofer IE, Meng S, Steinbacher J, Roka-Palkovits J, Györi E, Reissig LF, Cheng MH, Weninger WJ, Tzou CJ
The surgical anatomy of the vascularized lateral thoracic artery lymph node flap - a cadaver study
J Surg Oncol (2017), epub

Geyer SH, Reissig LF, Hüsemann M, Höfle C, Wilson R, Prin F, Szumska D, Galli A, Adams DJ, White J, Mohun TJ, Weninger WJ
Morphology, topology and dimensions of the heart and arteries of genetically normal and mutant mouse embryos of stages S21-S23
J Anat (2017), 231: 600-614

Eilenberg W, Stojkovic S, Piechota-Polanczky A, Kaider A, Kozakowski N, Weninger WJ, Nanobachviliv J, Wojta J, Huk I, Demyanets S, Neumayer C
Neutrophil gelatinase associated lipocalin (NGAL) is elevated in type 2 diabetics with carotid artery stenosis and reduced under metformin treatment
Cardiovasc Diabetol (2017), 16: 98

Steinbacher J, Yoshimatsu H, Meng S, Hamscha UM, Chan CS, Weninger WJ, Wu CT, Cheng MH, Tzou CH
Visualisation of skin perfusion by indocyanine green flourescence angiography - a feasibility study
Plast Reconstr Surger Global Open (2017), 5: e1455